USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: O60925 USC-OGP 2-DE database:  O60925 O60925 General information about the entry View entry in simple text format Entry name PFD1_HUMAN Primary accession number O60925 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Prefoldin subunit 1;. Gene name Name=PFDN1 Synonyms=PFD1 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0600: pI=5.92; Mw=11997 Cross-references UniProtKB/Swiss-Prot O60925; PFD1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name PFD1_HUMAN Primary accession number O60925 Secondary accession number(s) B2RD02 Q53F95 Q96EX6 Sequence was last modified on  August 13, 2002 (version 2) Annotations were last modified on  March 15, 2017 (version 140) Name and origin of the protein Description RecName: Full=Prefoldin subunit 1; Gene name Name=PFDN1 Synonyms=PFD1 Encoded on Name=PFDN1; Synonyms=PFD1 Keywords Acetylation; Chaperone; Complete proteome; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL Y17392; CAA76759.1; -; mRNA EMBL AK223394; BAD97114.1; -; mRNA EMBL AK315353; BAG37749.1; -; mRNA EMBL CH471062; EAW62071.1; -; Genomic_DNA EMBL BC003620; AAH03620.1; -; mRNA EMBL BC006202; AAH06202.1; -; mRNA EMBL BC011869; AAH11869.1; -; mRNA CCDS CCDS4222.1; -; . RefSeq NP_002613.2; NM_002622.4; . UniGene Hs.483564; -; . ProteinModelPortal O60925; -; . SMR O60925; -; . BioGrid 111223; 96; . IntAct O60925; 58; . MINT MINT-1143999; -; . STRING 9606.ENSP00000261813; -; . iPTMnet O60925; -; . PhosphoSitePlus O60925; -; . BioMuta PFDN1; -; . OGP O60925; -; . EPD O60925; -; . MaxQB O60925; -; . PaxDb O60925; -; . PeptideAtlas O60925; -; . PRIDE O60925; -; . TopDownProteomics O60925; -; . DNASU 5201; -; . Ensembl ENST00000261813; ENSP00000261813; ENSG00000113068; . GeneID 5201; -; . KEGG hsa:5201; -; . UCSC uc003lff.2; human; . CTD 5201; -; . GeneCards PFDN1; -; . HGNC HGNC:8866; PFDN1; . HPA HPA006499; -; . MIM 604897; gene; . neXtProt NX_O60925; -; . OpenTargets ENSG00000113068; -; . PharmGKB PA33207; -; . eggNOG ENOG410ISJS; Eukaryota; . eggNOG ENOG4111Q46; LUCA; . GeneTree ENSGT00390000009786; -; . HOGENOM HOG000005946; -; . HOVERGEN HBG031813; -; . InParanoid O60925; -; . KO K09548; -; . OMA DKCDKAI; -; . OrthoDB EOG091G0X1V; -; . PhylomeDB O60925; -; . TreeFam TF106490; -; . Reactome R-HSA-389957; Prefoldin mediated transfer of substrate to CCT/TriC; . GeneWiki PFDN1; -; . GenomeRNAi 5201; -; . PRO PR:O60925; -; . Proteomes UP000005640; Chromosome 5; . Bgee ENSG00000113068; -; . CleanEx HS_PFDN1; -; . ExpressionAtlas O60925; baseline and differential; . Genevisible O60925; HS; . GO GO:0016272; C:prefoldin complex; IEA:InterPro; . GO GO:0044183; F:protein binding involved in protein folding; IPI:AgBase; . GO GO:0003700; F:transcription factor activity; sequence-specific DNA binding; TAS:ProtInc GO GO:0007049; P:cell cycle; TAS:ProtInc; . Gene3D 1.10.287.370; -; 1; . InterPro IPR002777; PFD_beta-like; . InterPro IPR009053; Prefoldin; . Pfam PF01920; Prefoldin_2; 1; . SUPFAM SSF46579; SSF46579; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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